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Journal of Bioinformatics and Sequence Analysis

     
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  J. Bioinform. Seq. Anal.

 

  Vol. 1 No. 2

 
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 Meenakshisundaram K
 Gabriella M

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Journal of Bioinformatics and Sequence Analysis Vol. 1 (2), pp.031040, June 2009

© 2009 Academic Journals  

 

Full Length Research Paper

 

Existence of snoRNA, microRNA, piRNA characteristics in a novel non-coding RNA: x-ncRNA and its biological implication in Homo sapiens

 

Kandhavelu Meenakshisundaram,* Lammi Carmen, Buccioni Michela, Dal Ben Diego, Volpini Rosaria, Marucci Gabriella.

 

Pharma Biotech lab, Department of Chemical Science, University of Camerino, Via S. Agostino 1, Camerino (MC) - 62032, Italy.

 

*Corresponding author. E-mail: imsk1982@gmail.com. Tel: +358403553659.

Fax: +358 17 163 030.

 

Accepted 6 June, 2009

 

   Abstract

 

Comparative genomic analysis constitutes a powerful approach for the systematic understanding of genome. The comparative and evolutionary analysis of known microRNAs in Homo sapiens elucidates the discovery of the existence of the novel non-coding RNA, which is transcribed from the unique gene precursor and produces three different non coding RNAs such as piRNA, snoRNA and microRNA. This new characteristics RNA is named as x-non coding RNA (x-ncRNA). This characteristic pattern shows evolutionary signatures dictated by its precise selective significance and synteny. The evidence of x-ncRNA processing and functionality from hairpin arms were proven by systematic analysis. x-ncRNA analysis proven the bio genesis of human piRNA is originated from the dsDNA, which is also involved in the synthesis of piRNA and/or microRNA, through dicer. These data also shows the presence of human sno-microRNA. Our data demonstrates that the existence of x-ncRNA, genomic origin, conceivable bio genesis pathway, evolutionary relationship and its functions.

 

Key words: snoRNA, microRNA, piRNA, Biogenesis, novel noncoding RNA (x-ncRNA).

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