Table 1. Functional annotation of expressed sequence tags (ESTs) that produced BLASTX hits.

BLASTX annotation

E-value

No. of dbESTs hits

Mitochondrial 26S rRNA (Triticum aestivum, Z11889; Zea mays, K01868; Beta vulgaris, AP000397; Arabidopsis thaliana, Y08501)a

0.0

20

Mitochondrial DNA (Secale cereale, Z14059)

0.0

2

Mitochondrial 18S rRNA (Zea mays, X00794)

0.0

4

Mitochondrial 23S rRNA (Beta lupin, X87283)

4.00E-13

1

Mitochondrial 16S rRNA (Beta japonicum , Z35330)

0.0

2

SSUb rRNA (Drimys winteri, AF197162; Tetracentron sinense, AF193998;Grevillea robusta, AF193995; Trochodendron aralioides, AF161092; Nelumbo nucifera, AF193983; Platanus occidentalis, AF161090)

2.00E-87

6

S7 ribosomal fragment (Triticum aestivum, X67242 )

1.00E-03*

1*

S13 ribosomal fragment (Triticum aestivum, Y00520 )

0.085*

1*

Chloroplast DNA (Triticum aestivum, AB042240; Oryza sativa, AB042240.3; Zea mays, X15901; Hordeum vulgare, X86563; A. crassa, X86563.2; A. columnaris, X00408; Clinostigma savoyanum, X00408.1,)

0.0

15

Long terminal repeat (Hordeum vulgare, Z84569)

7.00E-03*

2*

Actin gene (Triticum monococccum, AF326781 )

8.00E-31

8

Resistance gene analogue2(Triticum monococccum, AF326781)

7.00E-13

6

Retrotransposon, MITEc (Hordeum vulgare, AB022688)

3.00E-76

5

Tonoplast DNA (Hordeum vulgare, AF254799)

6.00E-50

3

HMWd glutenin gene (Aegilops tauschii, AF497474)

1.00E-116

2

Noduline-like-protein (Triticum monococcum, AF326781)

2.00E-43

2

Chromosome condensation factor (Triticum monococcum, AF326781)

2.00E-43

2

mRNA for SSU, Rubisco (Triticum aestivum, K01229; Secale cereale, M37328; Hordeum vulgare, AJ131738; Triticum timopheevii, U43493; Triticum urartu, AB020955; Oryza sativa, AB020954; Avena strigosa, AF052305; Avena maroccana, AF097360; Aegilops squarrosa, AF104250; Aegilops bicornis, AB020938; Aegilops sharonensis, AB020936; Aegilops longissima, AB020935)

6.00E-58

24

ATP synthase b subunit (Clinostigma savoryanum, AB020933; Elaeis oleifera, AF449171; Cyphophoenis nucele, AY012452; Howea belmoreana, AY012445; Phoenix canariensis, AY012435; Linospadix longicruris, AF209652)

1.00E-168

6

Aldehyde dehydrogenase (Zea mays, AF449172)

3.00E-14

1

Microsatellite fragment (Oryza sativa, AF348415)

3.00E-07*

2*

Receptor-like kinase (Triticum aestivum, AY021654 )

6.00E-07*

2*

LRRe 19 (Triticum aestivum, AF325196)

6.00E-65

2

WIR pathogen Rf gene (Triticum  aestivum, AF325196)

1.00E-125

3

Leucine-rich-like protein (Aegilops tauschii, X87686)

1.00E-55

2

RGA link to resistance loci in rice (Oryza sativa, AB022168)

4.00E-16

1

actin (ACT-1) gene, partial cds (Triticum monococcum, AF326781)

4.00E-16

1

putative chromosome condensation factor (CCF) (Triticum monococcum, AF326781)

4.00E-16

1

putative resistance protein(RGA-2) (Triticum monococcum, AF326781)

4.00E-16

1

putative nodulin-like protein (NLL) gene (Triticum monococcum, AF326781)

6.00E-26

1

chloroplast matK gene for maturase (Cycas pectinata, AB076238.1; Zamia angustifolia, AB076567.1)

6.00E-26

2

clone tac 923.8 3' Ac insertion site sequence (Zea mays, AY065582.1)

1.00E-29

1

Genomic seq. BAC F27F5 (Arabidopsis thaliana, AC007915.3)

0.011*

1*

Germline Ig heavychain var. region (Macaca mulatta, U57580)

0.043*

1*

Genomic DNAChr. 1 BAC clone: OJ1294_F06 (Oryza sativa, AP004326.3)

0.0

1

Wheat chloroplast ATP synthase CF-1 gene, beta and epsilon  subunits, complete cds, and Met-tRNA gene (Triticum aestivum, M16843)

7.00E-29

1

Ty1-copia-like retrotransposon partial pol pseudogene, clone Tbn-1 (Beta nana, AJ489202)

2.00E-32

1

microsatellite DNA, CA-repeat (AC) (S. salar, Y11455)

0.0

1

Predicted membrane protein (Clostridium acetobutylicum, AE007615-4)

1.00E-03*

1*

Nucleotide binding site LRR protein-1 (Oryza sativa, AY043283)

4.00E-22

1

Nucleotide-binding leucine-rich-repeat protein 1 (Oryza sativa, AF271293)

1.00E-12

1

Nucleotide-binding leucine-rich-repeat protein-like (Oryza sativa, AP003802)

4.00E-14

2

Putative NBS-LLR type resistance protein (Oryza sativa, AC097447)

3.00E-13

1

Putative disease resistance protein (Oryza sativa, AC087181)

1.00E-55

 

Resistance gene candidate CC-NBS-LLR Class (Arabidopsis thaliana, NM_175742.1)

1.00E-33

1

F12M16 (Arabidopsis thaliana, AC008007)

4.00E-43

1

Disease resistance complex protein NBS-LRR class (Arabidopsis thaliana, NP_188065.1)

1.00E-43

1

Putative disease resistance protein CC-NBS Class (Arabidopsis thaliana, NM_104655)

1.00E-43

1

PRM1 homolog (Arabidopsis thaliana, AB028231)

1.00E-43

1

Putative RGA PIC23 -(Lactuca sativa, AF017751)

3.00E-16

1

Resistance complex protein I2-C-2 (Lycopersicon peruvianum, AF004879)

7.00E-13

1

NBS-LRR resistance protein candidate (Lactuca sativa, AF113949)

7.00E-13

1

Serine/threonine kinase protein (Triticum aestivum, Pseudoroegneria)

1.00E-18

2

Conserved hypothetical protein (E. coli, NC_002655, NC_003047)

6.00E-31

2

NBS-LRR type protein (r15) gene (Oryza sativa, AF032702)

6.00E-13

1

Resistance protein candidate RGC2A pseudogene (Lactuca sativa, AF072268)

1.00E-14

1

Polymyxin ß-resistance protein (Saccharomyces, S569090)

1.00E-04*

1*

Receptor like protein (Arabidopsis thaliana, NP_190339)

3.00E-13

1

Thioredoxcin (Triticum aestivum, AJ005840)

1.00E-66

1

18S ribosomal RNA (Triticum aestivum, AY049040)

0.440*

1*

Intergrase/recombinase (Brucella melitensis, AE009541)

1.00E-03*

1*

Intergrase-like protein (Bacteriophage H191, AJ236875)

0.61*

1*

Microsatellite DNA (Entandrophragma, AJ420885, Cocos, AJ458311)

3.00E-48

9

mRNA sequence (Zea mays, AY105736)

2.00E-287

2

Aminotransferase-like protein (Oryza sativa, AF105736)

5.00E-52

3

Genomic DNA chromosome 4 (Oryza sativa, AL662950)

9.00E-27

2

Giant Cell protein mRNA (Lycopersicon esculentum, L24012)

7.00E-03*

1*

RbcL for Rubisco (Oryza sativa, X62117;Triticum aestivum, X62119; Aegilops tauschii , X04789; Avena, L15300)

9.00E-44

9

Mitochondrial gene for tRNA-His (Oryza sativa, D13101)

2.00E-35

1

a.        NCBI accession number of homologous sequence

b.        Small subunit

c.        Miniature inverted terminal repeat element

d.        High molecular weight

e.        Leucine rich-repeat

f.         Resistance

*       Protein with discernable function